dbCAN HGM

Cluster: Rep_234_CGC2

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_234_c_17	Rep_234_c_17_3	3292	5232	-	GH51_2
CAZyme	Rep_234_c_17	Rep_234_c_17_4	5372	8641	-	GH2
CAZyme	Rep_234_c_17	Rep_234_c_17_5	8704	9909	-	GH105
CAZyme	Rep_234_c_17	Rep_234_c_17_6	9937	11211	-	GH154
CAZyme	Rep_234_c_17	Rep_234_c_17_7	11333	12430	-	GH43_24
pfam	Rep_234_c_17	Rep_234_c_17_8	12549	14570	-	SusD_RagB \| SusD-like_3
TC	Rep_234_c_17	Rep_234_c_17_9	14584	17859	-	1.B.14.6.1
TF	Rep_234_c_17	Rep_234_c_17_10	18109	22245	+	HTH_AraC
CAZyme	Rep_234_c_17	Rep_234_c_17_11	22293	24182	-	PL33_1

Gene ID: Rep_234_c_17_3
Type: CAZyme
Location: 3292 - 5232 (-)

Gene ID: Rep_234_c_17_4
Type: CAZyme
Location: 5372 - 8641 (-)

Gene ID: Rep_234_c_17_5
Type: CAZyme
Location: 8704 - 9909 (-)

Gene ID: Rep_234_c_17_6
Type: CAZyme
Location: 9937 - 11211 (-)

Gene ID: Rep_234_c_17_7
Type: CAZyme
Location: 11333 - 12430 (-)

Gene ID: Rep_234_c_17_8
Type: pfam
Location: 12549 - 14570 (-)

Gene ID: Rep_234_c_17_9
Type: TC
Location: 14584 - 17859 (-)

Gene ID: Rep_234_c_17_10
Type: TF
Location: 18109 - 22245 (+)

Gene ID: Rep_234_c_17_11
Type: CAZyme
Location: 22293 - 24182 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_234_c_17_5	vegetarian > omnivore	1.57263	0.01057
Rep_234_c_17_7	vegetarian > omnivore	1.56876	0.01057
Rep_234_c_17_10	vegetarian > omnivore	1.64134	0.01057
Rep_234_c_17_10	vegetarian > vegan	1.19005	0.00424