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Cluster: Rep_234_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_234_c_87 Rep_234_c_87_7 9607 10563 - GH43_1
CAZyme Rep_234_c_87 Rep_234_c_87_8 10610 11731 - GH10
TC Rep_234_c_87 Rep_234_c_87_9 11808 13241 - 2.A.2.3.2
pfam Rep_234_c_87 Rep_234_c_87_10 13297 14472 - Lipase_GDSL | Lipase_GDSL_2
TF Rep_234_c_87 Rep_234_c_87_11 14749 18666 + HTH_AraC
CAZyme Rep_234_c_87 Rep_234_c_87_12 18750 20759 + GH67
CAZyme Rep_234_c_87 Rep_234_c_87_13 20752 22398 + GH35
Gene ID: Rep_234_c_87_7
Type: CAZyme
Location: 9607 - 10563 (-)
Gene ID: Rep_234_c_87_8
Type: CAZyme
Location: 10610 - 11731 (-)
Gene ID: Rep_234_c_87_9
Type: TC
Location: 11808 - 13241 (-)
Gene ID: Rep_234_c_87_10
Type: pfam
Location: 13297 - 14472 (-)
Gene ID: Rep_234_c_87_11
Type: TF
Location: 14749 - 18666 (+)
Gene ID: Rep_234_c_87_12
Type: CAZyme
Location: 18750 - 20759 (+)
Gene ID: Rep_234_c_87_13
Type: CAZyme
Location: 20752 - 22398 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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