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Cluster: Rep_2349_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2349_c_8 Rep_2349_c_8_16 17746 18675 + GH25
STP Rep_2349_c_8 Rep_2349_c_8_17 18735 19559 + PfkB
NULL(UNKNOWN) Rep_2349_c_8 Rep_2349_c_8_18 19561 19818 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2349_c_8 Rep_2349_c_8_19 19945 20955 + 3.A.1.5.15
TC Rep_2349_c_8 Rep_2349_c_8_20 20942 21910 + 3.A.1.5.20
TC Rep_2349_c_8 Rep_2349_c_8_21 21998 23635 + 3.A.1.5.38
TC Rep_2349_c_8 Rep_2349_c_8_22 23803 24822 + 3.A.1.5.38
TC Rep_2349_c_8 Rep_2349_c_8_23 24822 25658 + 3.A.1.5.38
Gene ID: Rep_2349_c_8_16
Type: CAZyme
Location: 17746 - 18675 (+)
Gene ID: Rep_2349_c_8_17
Type: STP
Location: 18735 - 19559 (+)
Gene ID: Rep_2349_c_8_18
Type:
Location: 19561 - 19818 (+)
Gene ID: Rep_2349_c_8_19
Type: TC
Location: 19945 - 20955 (+)
Gene ID: Rep_2349_c_8_20
Type: TC
Location: 20942 - 21910 (+)
Gene ID: Rep_2349_c_8_21
Type: TC
Location: 21998 - 23635 (+)
Gene ID: Rep_2349_c_8_22
Type: TC
Location: 23803 - 24822 (+)
Gene ID: Rep_2349_c_8_23
Type: TC
Location: 24822 - 25658 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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