Cluster: Rep_2349_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2349
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2349_c_5 | Rep_2349_c_5_2 | 100 | 1389 | - | 3.A.7.15.1 |
| NULL(UNKNOWN) | Rep_2349_c_5 | Rep_2349_c_5_3 | 1402 | 2268 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2349_c_5 | Rep_2349_c_5_4 | 2511 | 2786 | - | BofA |
| CAZyme | Rep_2349_c_5 | Rep_2349_c_5_5 | 2837 | 4837 | - | CBM48 | GH13_9 |
| CAZyme | Rep_2349_c_5 | Rep_2349_c_5_6 | 4848 | 6191 | - | GH13_20 |
Gene ID: Rep_2349_c_5_2
Type: TC
Location: 100 - 1389 (-)
Type: TC
Location: 100 - 1389 (-)
Gene ID: Rep_2349_c_5_3
Type:
Location: 1402 - 2268 (-)
Type:
Location: 1402 - 2268 (-)
Gene ID: Rep_2349_c_5_4
Type: pfam
Location: 2511 - 2786 (-)
Type: pfam
Location: 2511 - 2786 (-)
Gene ID: Rep_2349_c_5_5
Type: CAZyme
Location: 2837 - 4837 (-)
Type: CAZyme
Location: 2837 - 4837 (-)
Gene ID: Rep_2349_c_5_6
Type: CAZyme
Location: 4848 - 6191 (-)
Type: CAZyme
Location: 4848 - 6191 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp902489645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.