Cluster: Rep_2349_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2349
- CGC Family ID: CGCFAM_04047
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2349_c_1 | Rep_2349_c_1_73 | 81714 | 82766 | - | 3.A.1.17.6 |
| TC | Rep_2349_c_1 | Rep_2349_c_1_74 | 82763 | 83506 | - | 3.A.1.17.3 |
| TC | Rep_2349_c_1 | Rep_2349_c_1_75 | 83508 | 84257 | - | 3.A.1.17.8 |
| pfam | Rep_2349_c_1 | Rep_2349_c_1_76 | 84261 | 84923 | - | TENA_THI-4 |
| CAZyme | Rep_2349_c_1 | Rep_2349_c_1_77 | 85084 | 86058 | - | GT2 |
| TC | Rep_2349_c_1 | Rep_2349_c_1_78 | 86154 | 86843 | + | 9.B.120.1.3 |
Gene ID: Rep_2349_c_1_73
Type: TC
Location: 81714 - 82766 (-)
Type: TC
Location: 81714 - 82766 (-)
Gene ID: Rep_2349_c_1_74
Type: TC
Location: 82763 - 83506 (-)
Type: TC
Location: 82763 - 83506 (-)
Gene ID: Rep_2349_c_1_75
Type: TC
Location: 83508 - 84257 (-)
Type: TC
Location: 83508 - 84257 (-)
Gene ID: Rep_2349_c_1_76
Type: pfam
Location: 84261 - 84923 (-)
Type: pfam
Location: 84261 - 84923 (-)
Gene ID: Rep_2349_c_1_77
Type: CAZyme
Location: 85084 - 86058 (-)
Type: CAZyme
Location: 85084 - 86058 (-)
Gene ID: Rep_2349_c_1_78
Type: TC
Location: 86154 - 86843 (+)
Type: TC
Location: 86154 - 86843 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp902489645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.