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Cluster: Rep_2349_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2349_c_71 Rep_2349_c_71_4 3260 5071 - GH73
pfam Rep_2349_c_71 Rep_2349_c_71_5 5064 5465 - DUF454
TC Rep_2349_c_71 Rep_2349_c_71_6 5500 6288 - 3.A.1.14.10
TC Rep_2349_c_71 Rep_2349_c_71_7 6278 7315 - 3.A.1.14.10
TC Rep_2349_c_71 Rep_2349_c_71_8 7330 8448 - 3.A.1.14.10
TC Rep_2349_c_71 Rep_2349_c_71_9 8435 9466 - 3.A.1.14.10
TF Rep_2349_c_71 Rep_2349_c_71_10 9773 10738 - HTH_AraC
TC Rep_2349_c_71 Rep_2349_c_71_11 10759 11469 - 3.A.1.31.1
Gene ID: Rep_2349_c_71_4
Type: CAZyme
Location: 3260 - 5071 (-)
Gene ID: Rep_2349_c_71_5
Type: pfam
Location: 5064 - 5465 (-)
Gene ID: Rep_2349_c_71_6
Type: TC
Location: 5500 - 6288 (-)
Gene ID: Rep_2349_c_71_7
Type: TC
Location: 6278 - 7315 (-)
Gene ID: Rep_2349_c_71_8
Type: TC
Location: 7330 - 8448 (-)
Gene ID: Rep_2349_c_71_9
Type: TC
Location: 8435 - 9466 (-)
Gene ID: Rep_2349_c_71_10
Type: TF
Location: 9773 - 10738 (-)
Gene ID: Rep_2349_c_71_11
Type: TC
Location: 10759 - 11469 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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