Cluster: Rep_2349_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2349
- CGC Family ID: CGCFAM_01544
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2349_c_60 | Rep_2349_c_60_3 | 2449 | 3156 | + | 3.A.1.122.2 |
| NULL(UNKNOWN) | Rep_2349_c_60 | Rep_2349_c_60_4 | 3128 | 4726 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2349_c_60 | Rep_2349_c_60_5 | 4741 | 5994 | + | 3.A.1.122.2 |
| CAZyme | Rep_2349_c_60 | Rep_2349_c_60_6 | 6119 | 7807 | - | GH18 |
Gene ID: Rep_2349_c_60_3
Type: TC
Location: 2449 - 3156 (+)
Type: TC
Location: 2449 - 3156 (+)
Gene ID: Rep_2349_c_60_4
Type:
Location: 3128 - 4726 (+)
Type:
Location: 3128 - 4726 (+)
Gene ID: Rep_2349_c_60_5
Type: TC
Location: 4741 - 5994 (+)
Type: TC
Location: 4741 - 5994 (+)
Gene ID: Rep_2349_c_60_6
Type: CAZyme
Location: 6119 - 7807 (-)
Type: CAZyme
Location: 6119 - 7807 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp902489645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.