Cluster: Rep_2349_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2349
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2349_c_48 | Rep_2349_c_48_13 | 10713 | 11627 | + | 3.A.1.131.1 |
| pfam | Rep_2349_c_48 | Rep_2349_c_48_14 | 11620 | 12444 | + | ABC2_membrane_2 |
| STP | Rep_2349_c_48 | Rep_2349_c_48_15 | 12455 | 13369 | + | HATPase_c | HisKA |
| CAZyme | Rep_2349_c_48 | Rep_2349_c_48_16 | 13450 | 15945 | - | GT35 |
Gene ID: Rep_2349_c_48_13
Type: TC
Location: 10713 - 11627 (+)
Type: TC
Location: 10713 - 11627 (+)
Gene ID: Rep_2349_c_48_14
Type: pfam
Location: 11620 - 12444 (+)
Type: pfam
Location: 11620 - 12444 (+)
Gene ID: Rep_2349_c_48_15
Type: STP
Location: 12455 - 13369 (+)
Type: STP
Location: 12455 - 13369 (+)
Gene ID: Rep_2349_c_48_16
Type: CAZyme
Location: 13450 - 15945 (-)
Type: CAZyme
Location: 13450 - 15945 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp902489645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.