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Cluster: Rep_2349_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2349_c_36 Rep_2349_c_36_7 6704 8311 + 3.A.1.5.28
TC Rep_2349_c_36 Rep_2349_c_36_8 8477 9406 + 3.A.1.5.20
TC Rep_2349_c_36 Rep_2349_c_36_9 9424 10311 + 3.A.1.5.20
TC Rep_2349_c_36 Rep_2349_c_36_10 10323 11351 + 3.A.1.5.12
TC Rep_2349_c_36 Rep_2349_c_36_11 11353 12372 + 3.A.1.5.20
pfam Rep_2349_c_36 Rep_2349_c_36_12 12369 12821 + DUF386
pfam Rep_2349_c_36 Rep_2349_c_36_13 12851 13768 + DHDPS
CAZyme Rep_2349_c_36 Rep_2349_c_36_14 13786 15240 + GH165
CAZyme Rep_2349_c_36 Rep_2349_c_36_15 15240 16394 + CE9
Gene ID: Rep_2349_c_36_7
Type: TC
Location: 6704 - 8311 (+)
Gene ID: Rep_2349_c_36_8
Type: TC
Location: 8477 - 9406 (+)
Gene ID: Rep_2349_c_36_9
Type: TC
Location: 9424 - 10311 (+)
Gene ID: Rep_2349_c_36_10
Type: TC
Location: 10323 - 11351 (+)
Gene ID: Rep_2349_c_36_11
Type: TC
Location: 11353 - 12372 (+)
Gene ID: Rep_2349_c_36_12
Type: pfam
Location: 12369 - 12821 (+)
Gene ID: Rep_2349_c_36_13
Type: pfam
Location: 12851 - 13768 (+)
Gene ID: Rep_2349_c_36_14
Type: CAZyme
Location: 13786 - 15240 (+)
Gene ID: Rep_2349_c_36_15
Type: CAZyme
Location: 15240 - 16394 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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