Cluster: Rep_2349_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2349
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2349_c_17 | Rep_2349_c_17_30 | 26667 | 28496 | + | 3.A.1.21.1 |
| TC | Rep_2349_c_17 | Rep_2349_c_17_31 | 28489 | 30237 | + | 3.A.1.106.2 |
| pfam | Rep_2349_c_17 | Rep_2349_c_17_32 | 30325 | 31161 | + | BacA |
| NULL(UNKNOWN) | Rep_2349_c_17 | Rep_2349_c_17_33 | 31278 | 31805 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2349_c_17 | Rep_2349_c_17_34 | 31944 | 33767 | + | GH13_11 |
Gene ID: Rep_2349_c_17_30
Type: TC
Location: 26667 - 28496 (+)
Type: TC
Location: 26667 - 28496 (+)
Gene ID: Rep_2349_c_17_31
Type: TC
Location: 28489 - 30237 (+)
Type: TC
Location: 28489 - 30237 (+)
Gene ID: Rep_2349_c_17_32
Type: pfam
Location: 30325 - 31161 (+)
Type: pfam
Location: 30325 - 31161 (+)
Gene ID: Rep_2349_c_17_33
Type:
Location: 31278 - 31805 (-)
Type:
Location: 31278 - 31805 (-)
Gene ID: Rep_2349_c_17_34
Type: CAZyme
Location: 31944 - 33767 (+)
Type: CAZyme
Location: 31944 - 33767 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp902489645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.