dbCAN Logo

Cluster: Rep_2349_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2349_c_13 Rep_2349_c_13_16 13998 15434 + GT5
pfam Rep_2349_c_13 Rep_2349_c_13_17 15431 16354 + EamA | EamA
pfam Rep_2349_c_13 Rep_2349_c_13_18 16518 17198 + Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC Rep_2349_c_13 Rep_2349_c_13_19 17216 18793 + 3.A.1.5.17
TC Rep_2349_c_13 Rep_2349_c_13_20 18825 19772 + 3.A.1.5.11
TC Rep_2349_c_13 Rep_2349_c_13_21 19772 20623 + 3.A.1.5.11
TC Rep_2349_c_13 Rep_2349_c_13_22 20625 21632 + 3.A.1.5.2
TC Rep_2349_c_13 Rep_2349_c_13_23 21625 22389 + 3.A.1.5.32
Gene ID: Rep_2349_c_13_16
Type: CAZyme
Location: 13998 - 15434 (+)
Gene ID: Rep_2349_c_13_17
Type: pfam
Location: 15431 - 16354 (+)
Gene ID: Rep_2349_c_13_18
Type: pfam
Location: 16518 - 17198 (+)
Gene ID: Rep_2349_c_13_19
Type: TC
Location: 17216 - 18793 (+)
Gene ID: Rep_2349_c_13_20
Type: TC
Location: 18825 - 19772 (+)
Gene ID: Rep_2349_c_13_21
Type: TC
Location: 19772 - 20623 (+)
Gene ID: Rep_2349_c_13_22
Type: TC
Location: 20625 - 21632 (+)
Gene ID: Rep_2349_c_13_23
Type: TC
Location: 21625 - 22389 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List