Cluster: Rep_2338_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2338
- CGC Family ID: CGCFAM_00105
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2338_c_3 | Rep_2338_c_3_45 | 45753 | 46484 | - | 3.A.1.103.4 |
| TC | Rep_2338_c_3 | Rep_2338_c_3_46 | 46484 | 47266 | - | 3.A.1.103.2 |
| CAZyme | Rep_2338_c_3 | Rep_2338_c_3_47 | 47263 | 48057 | - | GT2 |
| TC | Rep_2338_c_3 | Rep_2338_c_3_48 | 48059 | 49471 | - | 9.B.18.1.3 |
Gene ID: Rep_2338_c_3_45
Type: TC
Location: 45753 - 46484 (-)
Type: TC
Location: 45753 - 46484 (-)
Gene ID: Rep_2338_c_3_46
Type: TC
Location: 46484 - 47266 (-)
Type: TC
Location: 46484 - 47266 (-)
Gene ID: Rep_2338_c_3_47
Type: CAZyme
Location: 47263 - 48057 (-)
Type: CAZyme
Location: 47263 - 48057 (-)
Gene ID: Rep_2338_c_3_48
Type: TC
Location: 48059 - 49471 (-)
Type: TC
Location: 48059 - 49471 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Scybalocola
Species
Scybalocola sp902489925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.