Cluster: Rep_2338_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2338
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2338_c_0 | Rep_2338_c_0_77 | 81910 | 82872 | - | GH179 |
| TC | Rep_2338_c_0 | Rep_2338_c_0_78 | 83101 | 84138 | + | 3.A.1.132.1 |
| TC | Rep_2338_c_0 | Rep_2338_c_0_79 | 84122 | 84988 | + | 3.A.1.132.1 |
Gene ID: Rep_2338_c_0_77
Type: CAZyme
Location: 81910 - 82872 (-)
Type: CAZyme
Location: 81910 - 82872 (-)
Gene ID: Rep_2338_c_0_78
Type: TC
Location: 83101 - 84138 (+)
Type: TC
Location: 83101 - 84138 (+)
Gene ID: Rep_2338_c_0_79
Type: TC
Location: 84122 - 84988 (+)
Type: TC
Location: 84122 - 84988 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Scybalocola
Species
Scybalocola sp902489925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.