Cluster: Rep_2338_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2338
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2338_c_119 | Rep_2338_c_119_3 | 1616 | 2554 | + | 3.A.1.1.10 |
| TC | Rep_2338_c_119 | Rep_2338_c_119_4 | 2566 | 3462 | + | 3.A.1.1.29 |
| STP | Rep_2338_c_119 | Rep_2338_c_119_5 | 3478 | 5154 | + | SBP_bac_1 |
| CAZyme | Rep_2338_c_119 | Rep_2338_c_119_6 | 5169 | 6485 | + | GH32 |
Gene ID: Rep_2338_c_119_3
Type: TC
Location: 1616 - 2554 (+)
Type: TC
Location: 1616 - 2554 (+)
Gene ID: Rep_2338_c_119_4
Type: TC
Location: 2566 - 3462 (+)
Type: TC
Location: 2566 - 3462 (+)
Gene ID: Rep_2338_c_119_5
Type: STP
Location: 3478 - 5154 (+)
Type: STP
Location: 3478 - 5154 (+)
Gene ID: Rep_2338_c_119_6
Type: CAZyme
Location: 5169 - 6485 (+)
Type: CAZyme
Location: 5169 - 6485 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Scybalocola
Species
Scybalocola sp902489925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.