Cluster: Rep_2338_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2338
- CGC Family ID: CGCFAM_00642
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2338_c_44 | Rep_2338_c_44_1 | 2 | 742 | - | 3.A.7.15.1 |
| NULL(UNKNOWN) | Rep_2338_c_44 | Rep_2338_c_44_2 | 742 | 1647 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2338_c_44 | Rep_2338_c_44_3 | 1667 | 2188 | - | Peptidase_A24 |
| CAZyme | Rep_2338_c_44 | Rep_2338_c_44_4 | 2449 | 4431 | - | CBM48 | GH13_9 |
| CAZyme | Rep_2338_c_44 | Rep_2338_c_44_5 | 4445 | 5791 | - | GH13_20 |
Gene ID: Rep_2338_c_44_1
Type: TC
Location: 2 - 742 (-)
Type: TC
Location: 2 - 742 (-)
Gene ID: Rep_2338_c_44_2
Type:
Location: 742 - 1647 (-)
Type:
Location: 742 - 1647 (-)
Gene ID: Rep_2338_c_44_3
Type: pfam
Location: 1667 - 2188 (-)
Type: pfam
Location: 1667 - 2188 (-)
Gene ID: Rep_2338_c_44_4
Type: CAZyme
Location: 2449 - 4431 (-)
Type: CAZyme
Location: 2449 - 4431 (-)
Gene ID: Rep_2338_c_44_5
Type: CAZyme
Location: 4445 - 5791 (-)
Type: CAZyme
Location: 4445 - 5791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Scybalocola
Species
Scybalocola sp902489925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.