Cluster: Rep_2338_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: Rep_2338
- CGC Family ID: CGCFAM_00078
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2338_c_10 | Rep_2338_c_10_19 | 22753 | 24132 | + | 2.A.2.3.2 |
| CAZyme | Rep_2338_c_10 | Rep_2338_c_10_20 | 24098 | 26497 | + | GH3 |
| TC | Rep_2338_c_10 | Rep_2338_c_10_21 | 26563 | 27936 | - | 2.A.66.1.32 |
| CAZyme | Rep_2338_c_10 | Rep_2338_c_10_22 | 28277 | 30754 | + | GH2 |
Gene ID: Rep_2338_c_10_19
Type: TC
Location: 22753 - 24132 (+)
Type: TC
Location: 22753 - 24132 (+)
Gene ID: Rep_2338_c_10_20
Type: CAZyme
Location: 24098 - 26497 (+)
Type: CAZyme
Location: 24098 - 26497 (+)
Gene ID: Rep_2338_c_10_21
Type: TC
Location: 26563 - 27936 (-)
Type: TC
Location: 26563 - 27936 (-)
Gene ID: Rep_2338_c_10_22
Type: CAZyme
Location: 28277 - 30754 (+)
Type: CAZyme
Location: 28277 - 30754 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Scybalocola
Species
Scybalocola sp902489925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.