Cluster: Rep_2338_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2338
- CGC Family ID: CGCFAM_01660
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2338_c_7 | Rep_2338_c_7_36 | 35632 | 36705 | - | GH179 |
| pfam | Rep_2338_c_7 | Rep_2338_c_7_37 | 36965 | 37603 | - | Hydrolase | HAD_2 |
| CAZyme | Rep_2338_c_7 | Rep_2338_c_7_38 | 37600 | 39885 | - | GH65 |
| TC | Rep_2338_c_7 | Rep_2338_c_7_39 | 39972 | 40766 | - | 3.A.1.1.45 |
Gene ID: Rep_2338_c_7_36
Type: CAZyme
Location: 35632 - 36705 (-)
Type: CAZyme
Location: 35632 - 36705 (-)
Gene ID: Rep_2338_c_7_37
Type: pfam
Location: 36965 - 37603 (-)
Type: pfam
Location: 36965 - 37603 (-)
Gene ID: Rep_2338_c_7_38
Type: CAZyme
Location: 37600 - 39885 (-)
Type: CAZyme
Location: 37600 - 39885 (-)
Gene ID: Rep_2338_c_7_39
Type: TC
Location: 39972 - 40766 (-)
Type: TC
Location: 39972 - 40766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Scybalocola
Species
Scybalocola sp902489925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.