Cluster: Rep_2338_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2338
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2338_c_4 | Rep_2338_c_4_23 | 22793 | 24079 | + | 2.A.1.24.4 |
| pfam | Rep_2338_c_4 | Rep_2338_c_4_24 | 24165 | 25115 | + | ZnuA |
| TC | Rep_2338_c_4 | Rep_2338_c_4_25 | 25134 | 25859 | + | 3.A.1.15.8 |
| TC | Rep_2338_c_4 | Rep_2338_c_4_26 | 25843 | 26655 | + | 3.A.1.15.15 |
| CAZyme | Rep_2338_c_4 | Rep_2338_c_4_27 | 26850 | 27821 | + | GT2 |
Gene ID: Rep_2338_c_4_23
Type: TC
Location: 22793 - 24079 (+)
Type: TC
Location: 22793 - 24079 (+)
Gene ID: Rep_2338_c_4_24
Type: pfam
Location: 24165 - 25115 (+)
Type: pfam
Location: 24165 - 25115 (+)
Gene ID: Rep_2338_c_4_25
Type: TC
Location: 25134 - 25859 (+)
Type: TC
Location: 25134 - 25859 (+)
Gene ID: Rep_2338_c_4_26
Type: TC
Location: 25843 - 26655 (+)
Type: TC
Location: 25843 - 26655 (+)
Gene ID: Rep_2338_c_4_27
Type: CAZyme
Location: 26850 - 27821 (+)
Type: CAZyme
Location: 26850 - 27821 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Scybalocola
Species
Scybalocola sp902489925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.