Cluster: Rep_2338_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2338
- CGC Family ID: CGCFAM_00422
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2338_c_0 | Rep_2338_c_0_16 | 16850 | 17692 | + | 3.A.1.1.45 |
| TC | Rep_2338_c_0 | Rep_2338_c_0_17 | 17692 | 18513 | + | 3.A.1.1.45 |
| CAZyme | Rep_2338_c_0 | Rep_2338_c_0_18 | 18539 | 20182 | + | GH13_31 |
| CAZyme | Rep_2338_c_0 | Rep_2338_c_0_19 | 20347 | 21636 | - | GH125 |
Gene ID: Rep_2338_c_0_16
Type: TC
Location: 16850 - 17692 (+)
Type: TC
Location: 16850 - 17692 (+)
Gene ID: Rep_2338_c_0_17
Type: TC
Location: 17692 - 18513 (+)
Type: TC
Location: 17692 - 18513 (+)
Gene ID: Rep_2338_c_0_18
Type: CAZyme
Location: 18539 - 20182 (+)
Type: CAZyme
Location: 18539 - 20182 (+)
Gene ID: Rep_2338_c_0_19
Type: CAZyme
Location: 20347 - 21636 (-)
Type: CAZyme
Location: 20347 - 21636 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Scybalocola
Species
Scybalocola sp902489925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.