dbCAN HGM

Cluster: Rep_230_CGC33

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_230_c_192	Rep_230_c_192_7	7063	8085	-	1.A.33.1.5
pfam	Rep_230_c_192	Rep_230_c_192_8	8275	8868	-	AICARFT_IMPCHas \| MGS
TC	Rep_230_c_192	Rep_230_c_192_9	9288	11804	+	3.A.9.1.2
CAZyme	Rep_230_c_192	Rep_230_c_192_10	11915	15451	-	CBM67 \| GH78
CAZyme	Rep_230_c_192	Rep_230_c_192_11	15582	17393	-	GH141
CAZyme	Rep_230_c_192	Rep_230_c_192_12	17407	19518	-	GH127
CAZyme	Rep_230_c_192	Rep_230_c_192_13	19642	21639	-	GH97

Gene ID: Rep_230_c_192_7
Type: TC
Location: 7063 - 8085 (-)

Gene ID: Rep_230_c_192_8
Type: pfam
Location: 8275 - 8868 (-)

Gene ID: Rep_230_c_192_9
Type: TC
Location: 9288 - 11804 (+)

Gene ID: Rep_230_c_192_10
Type: CAZyme
Location: 11915 - 15451 (-)

Gene ID: Rep_230_c_192_11
Type: CAZyme
Location: 15582 - 17393 (-)

Gene ID: Rep_230_c_192_12
Type: CAZyme
Location: 17407 - 19518 (-)

Gene ID: Rep_230_c_192_13
Type: CAZyme
Location: 19642 - 21639 (-)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_230_c_192_10	vegetarian > omnivore	2.32694	0.02105
Rep_230_c_192_11	vegan > omnivore	2.82589	0.04384
Rep_230_c_192_11	vegetarian > omnivore	2.62715	0.02105
Rep_230_c_192_12	vegan > omnivore	2.51628	0.00701
Rep_230_c_192_12	vegetarian > omnivore	1.61078	0.02105
Rep_230_c_192_13	vegan > omnivore	2.02579	0.00701
Rep_230_c_192_13	vegetarian > omnivore	1.53138	0.02105