Cluster: Rep_230_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_230
- CGC Family ID: CGCFAM_05962
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_230_c_191 | Rep_230_c_191_12 | 17248 | 18510 | - | 1.A.11.2.7 |
| pfam | Rep_230_c_191 | Rep_230_c_191_13 | 18663 | 19019 | - | P-II |
| sulfatase | Rep_230_c_191 | Rep_230_c_191_14 | 19369 | 20631 | - | S1_19 |
| CAZyme | Rep_230_c_191 | Rep_230_c_191_15 | 20788 | 22512 | - | GH2 |
| CAZyme | Rep_230_c_191 | Rep_230_c_191_16 | 22523 | 24865 | - | GH20 |
Gene ID: Rep_230_c_191_12
Type: TC
Location: 17248 - 18510 (-)
Type: TC
Location: 17248 - 18510 (-)
Gene ID: Rep_230_c_191_13
Type: pfam
Location: 18663 - 19019 (-)
Type: pfam
Location: 18663 - 19019 (-)
Gene ID: Rep_230_c_191_14
Type: sulfatase
Location: 19369 - 20631 (-)
Type: sulfatase
Location: 19369 - 20631 (-)
Gene ID: Rep_230_c_191_15
Type: CAZyme
Location: 20788 - 22512 (-)
Type: CAZyme
Location: 20788 - 22512 (-)
Gene ID: Rep_230_c_191_16
Type: CAZyme
Location: 22523 - 24865 (-)
Type: CAZyme
Location: 22523 - 24865 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900551275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_230_c_191_14 | vegetarian > omnivore | 1.34649 | 0.02105 |