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Cluster: Rep_230_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_230_c_94 Rep_230_c_94_11 11187 13166 + 2.A.67.4.2
TF Rep_230_c_94 Rep_230_c_94_12 13255 17343 - HTH_AraC
NULL(UNKNOWN) Rep_230_c_94 Rep_230_c_94_13 17814 18032 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_230_c_94 Rep_230_c_94_14 18064 19743 - 8.A.46.1.1
TC Rep_230_c_94 Rep_230_c_94_15 19764 22799 - 1.B.14.6.1
CAZyme Rep_230_c_94 Rep_230_c_94_16 22983 25694 - GH146
NULL(UNKNOWN) Rep_230_c_94 Rep_230_c_94_17 25894 26115 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_230_c_94 Rep_230_c_94_18 26156 28630 + GH127
Gene ID: Rep_230_c_94_11
Type: TC
Location: 11187 - 13166 (+)
Gene ID: Rep_230_c_94_12
Type: TF
Location: 13255 - 17343 (-)
Gene ID: Rep_230_c_94_13
Type:
Location: 17814 - 18032 (-)
Gene ID: Rep_230_c_94_14
Type: TC
Location: 18064 - 19743 (-)
Gene ID: Rep_230_c_94_15
Type: TC
Location: 19764 - 22799 (-)
Gene ID: Rep_230_c_94_16
Type: CAZyme
Location: 22983 - 25694 (-)
Gene ID: Rep_230_c_94_17
Type:
Location: 25894 - 26115 (-)
Gene ID: Rep_230_c_94_18
Type: CAZyme
Location: 26156 - 28630 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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