Cluster: Rep_2300_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2300
- CGC Family ID: CGCFAM_00029
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2300_c_14 | Rep_2300_c_14_19 | 20096 | 22045 | + | 9.B.18.2.1 |
| pfam | Rep_2300_c_14 | Rep_2300_c_14_20 | 22042 | 23244 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | Rep_2300_c_14 | Rep_2300_c_14_21 | 23254 | 23934 | + | 9.B.18.1.3 |
| CAZyme | Rep_2300_c_14 | Rep_2300_c_14_22 | 23999 | 25252 | + | GT4 |
| CAZyme | Rep_2300_c_14 | Rep_2300_c_14_23 | 25262 | 26374 | + | GT4 |
Gene ID: Rep_2300_c_14_19
Type: TC
Location: 20096 - 22045 (+)
Type: TC
Location: 20096 - 22045 (+)
Gene ID: Rep_2300_c_14_20
Type: pfam
Location: 22042 - 23244 (+)
Type: pfam
Location: 22042 - 23244 (+)
Gene ID: Rep_2300_c_14_21
Type: TC
Location: 23254 - 23934 (+)
Type: TC
Location: 23254 - 23934 (+)
Gene ID: Rep_2300_c_14_22
Type: CAZyme
Location: 23999 - 25252 (+)
Type: CAZyme
Location: 23999 - 25252 (+)
Gene ID: Rep_2300_c_14_23
Type: CAZyme
Location: 25262 - 26374 (+)
Type: CAZyme
Location: 25262 - 26374 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp905203555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.