Cluster: Rep_2300_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2300
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2300_c_6 | Rep_2300_c_6_50 | 51250 | 51705 | + | 3.A.7.19.1 |
| pfam | Rep_2300_c_6 | Rep_2300_c_6_51 | 51744 | 52010 | + | Ribosomal_S18 |
| CAZyme | Rep_2300_c_6 | Rep_2300_c_6_52 | 52259 | 54508 | + | GH3 |
Gene ID: Rep_2300_c_6_50
Type: TC
Location: 51250 - 51705 (+)
Type: TC
Location: 51250 - 51705 (+)
Gene ID: Rep_2300_c_6_51
Type: pfam
Location: 51744 - 52010 (+)
Type: pfam
Location: 51744 - 52010 (+)
Gene ID: Rep_2300_c_6_52
Type: CAZyme
Location: 52259 - 54508 (+)
Type: CAZyme
Location: 52259 - 54508 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp905203555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.