Cluster: Rep_2300_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2300
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2300_c_61 | Rep_2300_c_61_5 | 3124 | 5841 | - | GH106 |
| CAZyme | Rep_2300_c_61 | Rep_2300_c_61_6 | 5851 | 8052 | - | GH2 |
| CAZyme | Rep_2300_c_61 | Rep_2300_c_61_7 | 8065 | 9918 | - | CBM32 | GH43_28 |
| TC | Rep_2300_c_61 | Rep_2300_c_61_8 | 9922 | 11388 | - | 2.A.2.3.6 |
| TF | Rep_2300_c_61 | Rep_2300_c_61_9 | 11405 | 12616 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | Rep_2300_c_61 | Rep_2300_c_61_10 | 12636 | 12896 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2300_c_61 | Rep_2300_c_61_11 | 12911 | 14215 | - | GH1 |
Gene ID: Rep_2300_c_61_5
Type: CAZyme
Location: 3124 - 5841 (-)
Type: CAZyme
Location: 3124 - 5841 (-)
Gene ID: Rep_2300_c_61_6
Type: CAZyme
Location: 5851 - 8052 (-)
Type: CAZyme
Location: 5851 - 8052 (-)
Gene ID: Rep_2300_c_61_7
Type: CAZyme
Location: 8065 - 9918 (-)
Type: CAZyme
Location: 8065 - 9918 (-)
Gene ID: Rep_2300_c_61_8
Type: TC
Location: 9922 - 11388 (-)
Type: TC
Location: 9922 - 11388 (-)
Gene ID: Rep_2300_c_61_9
Type: TF
Location: 11405 - 12616 (-)
Type: TF
Location: 11405 - 12616 (-)
Gene ID: Rep_2300_c_61_10
Type:
Location: 12636 - 12896 (-)
Type:
Location: 12636 - 12896 (-)
Gene ID: Rep_2300_c_61_11
Type: CAZyme
Location: 12911 - 14215 (-)
Type: CAZyme
Location: 12911 - 14215 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp905203555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.