Cluster: Rep_2300_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2300
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2300_c_39 | Rep_2300_c_39_9 | 5777 | 7972 | - | GH95 |
| pfam | Rep_2300_c_39 | Rep_2300_c_39_10 | 8030 | 8209 | - | DUF6903 |
| TC | Rep_2300_c_39 | Rep_2300_c_39_11 | 8222 | 9115 | - | 3.A.1.1.18 |
| TC | Rep_2300_c_39 | Rep_2300_c_39_12 | 9128 | 10027 | - | 3.A.1.1.20 |
Gene ID: Rep_2300_c_39_9
Type: CAZyme
Location: 5777 - 7972 (-)
Type: CAZyme
Location: 5777 - 7972 (-)
Gene ID: Rep_2300_c_39_10
Type: pfam
Location: 8030 - 8209 (-)
Type: pfam
Location: 8030 - 8209 (-)
Gene ID: Rep_2300_c_39_11
Type: TC
Location: 8222 - 9115 (-)
Type: TC
Location: 8222 - 9115 (-)
Gene ID: Rep_2300_c_39_12
Type: TC
Location: 9128 - 10027 (-)
Type: TC
Location: 9128 - 10027 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp905203555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.