Cluster: Rep_2300_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: Rep_2300
- CGC Family ID: CGCFAM_00174
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2300_c_0 | Rep_2300_c_0_92 | 99883 | 100362 | + | 4.A.1.2.1 |
| TC | Rep_2300_c_0 | Rep_2300_c_0_93 | 100446 | 101273 | + | 4.A.1.2.1 |
| CAZyme | Rep_2300_c_0 | Rep_2300_c_0_94 | 101292 | 102689 | + | GH32 |
| CAZyme | Rep_2300_c_0 | Rep_2300_c_0_95 | 102789 | 103529 | + | GH73 |
Gene ID: Rep_2300_c_0_92
Type: TC
Location: 99883 - 100362 (+)
Type: TC
Location: 99883 - 100362 (+)
Gene ID: Rep_2300_c_0_93
Type: TC
Location: 100446 - 101273 (+)
Type: TC
Location: 100446 - 101273 (+)
Gene ID: Rep_2300_c_0_94
Type: CAZyme
Location: 101292 - 102689 (+)
Type: CAZyme
Location: 101292 - 102689 (+)
Gene ID: Rep_2300_c_0_95
Type: CAZyme
Location: 102789 - 103529 (+)
Type: CAZyme
Location: 102789 - 103529 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp905203555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.