Cluster: Rep_2300_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2300
- CGC Family ID: CGCFAM_02311
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2300_c_27 | Rep_2300_c_27_14 | 16427 | 17440 | + | 2.A.119.1.3 |
| pfam | Rep_2300_c_27 | Rep_2300_c_27_15 | 17457 | 17789 | + | Thioredoxin_3 |
| CAZyme | Rep_2300_c_27 | Rep_2300_c_27_16 | 17807 | 18736 | + | GT2 |
Gene ID: Rep_2300_c_27_14
Type: TC
Location: 16427 - 17440 (+)
Type: TC
Location: 16427 - 17440 (+)
Gene ID: Rep_2300_c_27_15
Type: pfam
Location: 17457 - 17789 (+)
Type: pfam
Location: 17457 - 17789 (+)
Gene ID: Rep_2300_c_27_16
Type: CAZyme
Location: 17807 - 18736 (+)
Type: CAZyme
Location: 17807 - 18736 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp905203555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.