Cluster: Rep_2300_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2300
- CGC Family ID: CGCFAM_00506
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2300_c_22 | Rep_2300_c_22_31 | 32380 | 33705 | + | 9.A.40.2.4 |
| TC | Rep_2300_c_22 | Rep_2300_c_22_32 | 33893 | 34642 | - | 9.B.158.1.1 |
| TC | Rep_2300_c_22 | Rep_2300_c_22_33 | 34772 | 36238 | - | 4.A.1.1.7 |
| TC | Rep_2300_c_22 | Rep_2300_c_22_34 | 36323 | 36811 | - | 4.A.1.2.11 |
| pfam | Rep_2300_c_22 | Rep_2300_c_22_35 | 36823 | 37668 | - | PRD | PRD | CAT_RBD |
| CAZyme | Rep_2300_c_22 | Rep_2300_c_22_36 | 37904 | 39031 | - | CE9 |
Gene ID: Rep_2300_c_22_31
Type: TC
Location: 32380 - 33705 (+)
Type: TC
Location: 32380 - 33705 (+)
Gene ID: Rep_2300_c_22_32
Type: TC
Location: 33893 - 34642 (-)
Type: TC
Location: 33893 - 34642 (-)
Gene ID: Rep_2300_c_22_33
Type: TC
Location: 34772 - 36238 (-)
Type: TC
Location: 34772 - 36238 (-)
Gene ID: Rep_2300_c_22_34
Type: TC
Location: 36323 - 36811 (-)
Type: TC
Location: 36323 - 36811 (-)
Gene ID: Rep_2300_c_22_35
Type: pfam
Location: 36823 - 37668 (-)
Type: pfam
Location: 36823 - 37668 (-)
Gene ID: Rep_2300_c_22_36
Type: CAZyme
Location: 37904 - 39031 (-)
Type: CAZyme
Location: 37904 - 39031 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp905203555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.