Cluster: Rep_2300_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2300
- CGC Family ID: CGCFAM_00187
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2300_c_17 | Rep_2300_c_17_28 | 32810 | 34735 | + | GH13_9 |
| TC | Rep_2300_c_17 | Rep_2300_c_17_29 | 35221 | 35844 | - | 3.A.2.3.2 |
| TC | Rep_2300_c_17 | Rep_2300_c_17_30 | 35861 | 37249 | - | 3.A.2.3.2 |
| TC | Rep_2300_c_17 | Rep_2300_c_17_31 | 37265 | 39070 | - | 3.A.2.3.2 |
Gene ID: Rep_2300_c_17_28
Type: CAZyme
Location: 32810 - 34735 (+)
Type: CAZyme
Location: 32810 - 34735 (+)
Gene ID: Rep_2300_c_17_29
Type: TC
Location: 35221 - 35844 (-)
Type: TC
Location: 35221 - 35844 (-)
Gene ID: Rep_2300_c_17_30
Type: TC
Location: 35861 - 37249 (-)
Type: TC
Location: 35861 - 37249 (-)
Gene ID: Rep_2300_c_17_31
Type: TC
Location: 37265 - 39070 (-)
Type: TC
Location: 37265 - 39070 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp905203555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.