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Cluster: Rep_2275_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2275_c_11 Rep_2275_c_11_3 2255 2845 - 2.A.115.2.14
TC Rep_2275_c_11 Rep_2275_c_11_4 2873 3568 - 2.A.122.1.4
TC Rep_2275_c_11 Rep_2275_c_11_5 3549 3917 - 1.E.14.1.1
peptidase Rep_2275_c_11 Rep_2275_c_11_6 4073 5293 + M20.UPB
peptidase Rep_2275_c_11 Rep_2275_c_11_7 5400 6605 - M15.UPB
CAZyme Rep_2275_c_11 Rep_2275_c_11_8 6725 8650 - GH2
CAZyme Rep_2275_c_11 Rep_2275_c_11_9 9334 11139 - GH38
CAZyme Rep_2275_c_11 Rep_2275_c_11_10 11362 12651 - GH125
TC Rep_2275_c_11 Rep_2275_c_11_11 12779 14155 - 2.A.66.1.32
Gene ID: Rep_2275_c_11_3
Type: TC
Location: 2255 - 2845 (-)
Gene ID: Rep_2275_c_11_4
Type: TC
Location: 2873 - 3568 (-)
Gene ID: Rep_2275_c_11_5
Type: TC
Location: 3549 - 3917 (-)
Gene ID: Rep_2275_c_11_6
Type: peptidase
Location: 4073 - 5293 (+)
Gene ID: Rep_2275_c_11_7
Type: peptidase
Location: 5400 - 6605 (-)
Gene ID: Rep_2275_c_11_8
Type: CAZyme
Location: 6725 - 8650 (-)
Gene ID: Rep_2275_c_11_9
Type: CAZyme
Location: 9334 - 11139 (-)
Gene ID: Rep_2275_c_11_10
Type: CAZyme
Location: 11362 - 12651 (-)
Gene ID: Rep_2275_c_11_11
Type: TC
Location: 12779 - 14155 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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