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Cluster: Rep_2275_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2275_c_206 Rep_2275_c_206_1 220 1308 + GH25
NULL(UNKNOWN) Rep_2275_c_206 Rep_2275_c_206_2 1429 1989 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2275_c_206 Rep_2275_c_206_3 2218 3897 + DUF975 | ABC_trans_CmpB
TC Rep_2275_c_206 Rep_2275_c_206_4 3956 4636 - 3.A.1.5.20
Gene ID: Rep_2275_c_206_1
Type: CAZyme
Location: 220 - 1308 (+)
Gene ID: Rep_2275_c_206_2
Type:
Location: 1429 - 1989 (-)
Gene ID: Rep_2275_c_206_3
Type: pfam
Location: 2218 - 3897 (+)
Gene ID: Rep_2275_c_206_4
Type: TC
Location: 3956 - 4636 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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