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Cluster: Rep_2275_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2275_c_73 Rep_2275_c_73_1 1 1320 - GT2 | GT2
peptidase Rep_2275_c_73 Rep_2275_c_73_2 1471 2697 + S11.UPW
CAZyme Rep_2275_c_73 Rep_2275_c_73_3 2784 5192 - GT2 | GT2
CAZyme Rep_2275_c_73 Rep_2275_c_73_4 5210 7693 - GT2 | GT2
NULL(UNKNOWN) Rep_2275_c_73 Rep_2275_c_73_5 7702 8982 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2275_c_73 Rep_2275_c_73_6 8984 9898 - RrnaAD | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
TC Rep_2275_c_73 Rep_2275_c_73_7 9911 11176 - 3.A.1.103.6
TC Rep_2275_c_73 Rep_2275_c_73_8 11188 12003 - 3.A.1.104.1
Gene ID: Rep_2275_c_73_1
Type: CAZyme
Location: 1 - 1320 (-)
Gene ID: Rep_2275_c_73_2
Type: peptidase
Location: 1471 - 2697 (+)
Gene ID: Rep_2275_c_73_3
Type: CAZyme
Location: 2784 - 5192 (-)
Gene ID: Rep_2275_c_73_4
Type: CAZyme
Location: 5210 - 7693 (-)
Gene ID: Rep_2275_c_73_5
Type:
Location: 7702 - 8982 (-)
Gene ID: Rep_2275_c_73_6
Type: pfam
Location: 8984 - 9898 (-)
Gene ID: Rep_2275_c_73_7
Type: TC
Location: 9911 - 11176 (-)
Gene ID: Rep_2275_c_73_8
Type: TC
Location: 11188 - 12003 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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