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Cluster: Rep_2275_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2275_c_56 Rep_2275_c_56_12 11318 12004 + 3.A.1.140.1
pfam Rep_2275_c_56 Rep_2275_c_56_13 11994 12905 + FtsX | FtsX_ECD
TC Rep_2275_c_56 Rep_2275_c_56_14 13001 14203 + 9.B.174.1.2
TC Rep_2275_c_56 Rep_2275_c_56_15 14270 14848 + 4.F.1.1.7
pfam Rep_2275_c_56 Rep_2275_c_56_16 14914 15477 + G3P_acyltransf
CAZyme Rep_2275_c_56 Rep_2275_c_56_17 15481 16605 + GT28
Gene ID: Rep_2275_c_56_12
Type: TC
Location: 11318 - 12004 (+)
Gene ID: Rep_2275_c_56_13
Type: pfam
Location: 11994 - 12905 (+)
Gene ID: Rep_2275_c_56_14
Type: TC
Location: 13001 - 14203 (+)
Gene ID: Rep_2275_c_56_15
Type: TC
Location: 14270 - 14848 (+)
Gene ID: Rep_2275_c_56_16
Type: pfam
Location: 14914 - 15477 (+)
Gene ID: Rep_2275_c_56_17
Type: CAZyme
Location: 15481 - 16605 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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