Cluster: Rep_2275_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2275
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2275_c_36 | Rep_2275_c_36_18 | 15192 | 16043 | - | 3.A.1.1.28 |
| TC | Rep_2275_c_36 | Rep_2275_c_36_19 | 16043 | 16918 | - | 3.A.1.1.28 |
| TC | Rep_2275_c_36 | Rep_2275_c_36_20 | 16931 | 18232 | - | 3.A.1.1.28 |
| CAZyme | Rep_2275_c_36 | Rep_2275_c_36_21 | 18237 | 19871 | - | GH13_31 |
| TF | Rep_2275_c_36 | Rep_2275_c_36_22 | 20088 | 21116 | - | LacI |
| NULL(UNKNOWN) | Rep_2275_c_36 | Rep_2275_c_36_23 | 21314 | 22114 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2275_c_36 | Rep_2275_c_36_24 | 22137 | 23855 | - | GH18 |
Gene ID: Rep_2275_c_36_18
Type: TC
Location: 15192 - 16043 (-)
Type: TC
Location: 15192 - 16043 (-)
Gene ID: Rep_2275_c_36_19
Type: TC
Location: 16043 - 16918 (-)
Type: TC
Location: 16043 - 16918 (-)
Gene ID: Rep_2275_c_36_20
Type: TC
Location: 16931 - 18232 (-)
Type: TC
Location: 16931 - 18232 (-)
Gene ID: Rep_2275_c_36_21
Type: CAZyme
Location: 18237 - 19871 (-)
Type: CAZyme
Location: 18237 - 19871 (-)
Gene ID: Rep_2275_c_36_22
Type: TF
Location: 20088 - 21116 (-)
Type: TF
Location: 20088 - 21116 (-)
Gene ID: Rep_2275_c_36_23
Type:
Location: 21314 - 22114 (-)
Type:
Location: 21314 - 22114 (-)
Gene ID: Rep_2275_c_36_24
Type: CAZyme
Location: 22137 - 23855 (-)
Type: CAZyme
Location: 22137 - 23855 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia
Species
Blautia ornithocaccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2275_c_36_18 | vegan > omnivore | 2.44037 | 0.03762 |