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Cluster: Rep_2275_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2275_c_21 Rep_2275_c_21_16 14737 15969 - GH10
CAZyme Rep_2275_c_21 Rep_2275_c_21_17 17014 18567 - CBM91 | GH43_12
CAZyme Rep_2275_c_21 Rep_2275_c_21_18 18581 20287 - CE17
CAZyme Rep_2275_c_21 Rep_2275_c_21_19 20345 21490 - GH8
TC Rep_2275_c_21 Rep_2275_c_21_20 21628 22536 - 3.A.1.1.29
TC Rep_2275_c_21 Rep_2275_c_21_21 22549 23508 - 3.A.1.1.29
TC Rep_2275_c_21 Rep_2275_c_21_22 23593 25263 - 3.A.1.1.29
Gene ID: Rep_2275_c_21_16
Type: CAZyme
Location: 14737 - 15969 (-)
Gene ID: Rep_2275_c_21_17
Type: CAZyme
Location: 17014 - 18567 (-)
Gene ID: Rep_2275_c_21_18
Type: CAZyme
Location: 18581 - 20287 (-)
Gene ID: Rep_2275_c_21_19
Type: CAZyme
Location: 20345 - 21490 (-)
Gene ID: Rep_2275_c_21_20
Type: TC
Location: 21628 - 22536 (-)
Gene ID: Rep_2275_c_21_21
Type: TC
Location: 22549 - 23508 (-)
Gene ID: Rep_2275_c_21_22
Type: TC
Location: 23593 - 25263 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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