Cluster: Rep_2274_CGC6
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 10
- Substrate:
- Genome ID: Rep_2274
- CGC Family ID: CGCFAM_00036
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2274_c_2 | Rep_2274_c_2_19 | 17816 | 18514 | + | 9.B.18.1.3 |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_20 | 18584 | 19801 | + | GT4 |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_21 | 19803 | 20873 | + | GT2 |
| pfam | Rep_2274_c_2 | Rep_2274_c_2_22 | 20944 | 22041 | + | Amino_oxidase | GLF | NAD_binding_8 |
| pfam | Rep_2274_c_2 | Rep_2274_c_2_23 | 22053 | 23393 | + | Wzy_C |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_24 | 23413 | 24519 | + | GT4 |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_25 | 24530 | 25543 | + | GT2 |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_26 | 25547 | 26554 | + | GT2 |
| TC | Rep_2274_c_2 | Rep_2274_c_2_27 | 26555 | 28012 | + | 2.A.66.2.16 |
| TC | Rep_2274_c_2 | Rep_2274_c_2_28 | 28030 | 29439 | + | 9.B.18.1.2 |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_29 | 29457 | 30650 | + | GT4 |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_30 | 30647 | 31837 | + | GT4 |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_31 | 31848 | 32792 | + | GT2 |
| pfam | Rep_2274_c_2 | Rep_2274_c_2_32 | 32783 | 33826 | + | Glyco_trans_1_4 |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_33 | 33842 | 35014 | + | GT4 |
| CAZyme | Rep_2274_c_2 | Rep_2274_c_2_34 | 35017 | 36075 | + | GT113 |
Gene ID: Rep_2274_c_2_19
Type: TC
Location: 17816 - 18514 (+)
Type: TC
Location: 17816 - 18514 (+)
Gene ID: Rep_2274_c_2_20
Type: CAZyme
Location: 18584 - 19801 (+)
Type: CAZyme
Location: 18584 - 19801 (+)
Gene ID: Rep_2274_c_2_21
Type: CAZyme
Location: 19803 - 20873 (+)
Type: CAZyme
Location: 19803 - 20873 (+)
Gene ID: Rep_2274_c_2_22
Type: pfam
Location: 20944 - 22041 (+)
Type: pfam
Location: 20944 - 22041 (+)
Gene ID: Rep_2274_c_2_23
Type: pfam
Location: 22053 - 23393 (+)
Type: pfam
Location: 22053 - 23393 (+)
Gene ID: Rep_2274_c_2_24
Type: CAZyme
Location: 23413 - 24519 (+)
Type: CAZyme
Location: 23413 - 24519 (+)
Gene ID: Rep_2274_c_2_25
Type: CAZyme
Location: 24530 - 25543 (+)
Type: CAZyme
Location: 24530 - 25543 (+)
Gene ID: Rep_2274_c_2_26
Type: CAZyme
Location: 25547 - 26554 (+)
Type: CAZyme
Location: 25547 - 26554 (+)
Gene ID: Rep_2274_c_2_27
Type: TC
Location: 26555 - 28012 (+)
Type: TC
Location: 26555 - 28012 (+)
Gene ID: Rep_2274_c_2_28
Type: TC
Location: 28030 - 29439 (+)
Type: TC
Location: 28030 - 29439 (+)
Gene ID: Rep_2274_c_2_29
Type: CAZyme
Location: 29457 - 30650 (+)
Type: CAZyme
Location: 29457 - 30650 (+)
Gene ID: Rep_2274_c_2_30
Type: CAZyme
Location: 30647 - 31837 (+)
Type: CAZyme
Location: 30647 - 31837 (+)
Gene ID: Rep_2274_c_2_31
Type: CAZyme
Location: 31848 - 32792 (+)
Type: CAZyme
Location: 31848 - 32792 (+)
Gene ID: Rep_2274_c_2_32
Type: pfam
Location: 32783 - 33826 (+)
Type: pfam
Location: 32783 - 33826 (+)
Gene ID: Rep_2274_c_2_33
Type: CAZyme
Location: 33842 - 35014 (+)
Type: CAZyme
Location: 33842 - 35014 (+)
Gene ID: Rep_2274_c_2_34
Type: CAZyme
Location: 35017 - 36075 (+)
Type: CAZyme
Location: 35017 - 36075 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia
Species
Blautia avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.