Cluster: Rep_2274_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_2274
- CGC Family ID: CGCFAM_11248
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2274_c_1 | Rep_2274_c_1_20 | 22360 | 23901 | - | CBM91 | GH43_10 |
| CAZyme | Rep_2274_c_1 | Rep_2274_c_1_21 | 23926 | 25428 | - | GH51_1 |
| CAZyme | Rep_2274_c_1 | Rep_2274_c_1_22 | 25602 | 27116 | - | GH51_1 |
| TF | Rep_2274_c_1 | Rep_2274_c_1_23 | 27344 | 28270 | + | HTH_5 |
| TC | Rep_2274_c_1 | Rep_2274_c_1_24 | 28415 | 29305 | - | 3.A.1.1.34 |
| peptidase | Rep_2274_c_1 | Rep_2274_c_1_25 | 29596 | 30579 | - | S09.B04 |
| CAZyme | Rep_2274_c_1 | Rep_2274_c_1_26 | 30912 | 33176 | - | GT35 |
| TF | Rep_2274_c_1 | Rep_2274_c_1_27 | 33236 | 34270 | - | LacI |
| CAZyme | Rep_2274_c_1 | Rep_2274_c_1_28 | 34332 | 35807 | - | GH77 |
| pfam | Rep_2274_c_1 | Rep_2274_c_1_29 | 36015 | 36434 | - | Zn_peptidase_2 |
| NULL(UNKNOWN) | Rep_2274_c_1 | Rep_2274_c_1_30 | 36525 | 36941 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2274_c_1 | Rep_2274_c_1_31 | 37026 | 38489 | - | GH4 |
Gene ID: Rep_2274_c_1_20
Type: CAZyme
Location: 22360 - 23901 (-)
Type: CAZyme
Location: 22360 - 23901 (-)
Gene ID: Rep_2274_c_1_21
Type: CAZyme
Location: 23926 - 25428 (-)
Type: CAZyme
Location: 23926 - 25428 (-)
Gene ID: Rep_2274_c_1_22
Type: CAZyme
Location: 25602 - 27116 (-)
Type: CAZyme
Location: 25602 - 27116 (-)
Gene ID: Rep_2274_c_1_23
Type: TF
Location: 27344 - 28270 (+)
Type: TF
Location: 27344 - 28270 (+)
Gene ID: Rep_2274_c_1_24
Type: TC
Location: 28415 - 29305 (-)
Type: TC
Location: 28415 - 29305 (-)
Gene ID: Rep_2274_c_1_25
Type: peptidase
Location: 29596 - 30579 (-)
Type: peptidase
Location: 29596 - 30579 (-)
Gene ID: Rep_2274_c_1_26
Type: CAZyme
Location: 30912 - 33176 (-)
Type: CAZyme
Location: 30912 - 33176 (-)
Gene ID: Rep_2274_c_1_27
Type: TF
Location: 33236 - 34270 (-)
Type: TF
Location: 33236 - 34270 (-)
Gene ID: Rep_2274_c_1_28
Type: CAZyme
Location: 34332 - 35807 (-)
Type: CAZyme
Location: 34332 - 35807 (-)
Gene ID: Rep_2274_c_1_29
Type: pfam
Location: 36015 - 36434 (-)
Type: pfam
Location: 36015 - 36434 (-)
Gene ID: Rep_2274_c_1_30
Type:
Location: 36525 - 36941 (-)
Type:
Location: 36525 - 36941 (-)
Gene ID: Rep_2274_c_1_31
Type: CAZyme
Location: 37026 - 38489 (-)
Type: CAZyme
Location: 37026 - 38489 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia
Species
Blautia avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2274_c_1_22 | vegetarian > omnivore | 1.61103 | 0.01846 |