Cluster: Rep_2274_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2274
- CGC Family ID: CGCFAM_06018
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2274_c_13 | Rep_2274_c_13_12 | 11422 | 12183 | - | 3.A.1.7.5 |
| TC | Rep_2274_c_13 | Rep_2274_c_13_13 | 12193 | 13071 | - | 3.A.1.7.5 |
| TC | Rep_2274_c_13 | Rep_2274_c_13_14 | 13064 | 13936 | - | 3.A.1.7.5 |
| pfam | Rep_2274_c_13 | Rep_2274_c_13_15 | 13974 | 14906 | - | PBP_like_2 | PBP_like_2 |
| TF | Rep_2274_c_13 | Rep_2274_c_13_16 | 15076 | 15996 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2274_c_13 | Rep_2274_c_13_17 | 16229 | 16948 | + | 2.A.115.2.3 |
| CAZyme | Rep_2274_c_13 | Rep_2274_c_13_18 | 17087 | 18409 | - | GH4 |
Gene ID: Rep_2274_c_13_12
Type: TC
Location: 11422 - 12183 (-)
Type: TC
Location: 11422 - 12183 (-)
Gene ID: Rep_2274_c_13_13
Type: TC
Location: 12193 - 13071 (-)
Type: TC
Location: 12193 - 13071 (-)
Gene ID: Rep_2274_c_13_14
Type: TC
Location: 13064 - 13936 (-)
Type: TC
Location: 13064 - 13936 (-)
Gene ID: Rep_2274_c_13_15
Type: pfam
Location: 13974 - 14906 (-)
Type: pfam
Location: 13974 - 14906 (-)
Gene ID: Rep_2274_c_13_16
Type: TF
Location: 15076 - 15996 (-)
Type: TF
Location: 15076 - 15996 (-)
Gene ID: Rep_2274_c_13_17
Type: TC
Location: 16229 - 16948 (+)
Type: TC
Location: 16229 - 16948 (+)
Gene ID: Rep_2274_c_13_18
Type: CAZyme
Location: 17087 - 18409 (-)
Type: CAZyme
Location: 17087 - 18409 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia
Species
Blautia avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.