Cluster: Rep_2271_CGC38
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2271
- CGC Family ID: CGCFAM_03712
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2271_c_24 | Rep_2271_c_24_3 | 2847 | 4142 | + | 3.A.1.2.20 |
| NULL(UNKNOWN) | Rep_2271_c_24 | Rep_2271_c_24_4 | 4373 | 4681 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2271_c_24 | Rep_2271_c_24_5 | 4722 | 6758 | + | 3.A.2.2.2 |
| TC | Rep_2271_c_24 | Rep_2271_c_24_6 | 6755 | 7225 | + | 3.A.2.2.2 |
| pfam | Rep_2271_c_24 | Rep_2271_c_24_7 | 7277 | 7876 | + | vATP-synt_E |
| pfam | Rep_2271_c_24 | Rep_2271_c_24_8 | 7898 | 8875 | + | vATP-synt_AC39 |
| TC | Rep_2271_c_24 | Rep_2271_c_24_9 | 8868 | 9188 | + | 3.A.2.2.2 |
| TC | Rep_2271_c_24 | Rep_2271_c_24_10 | 9209 | 10975 | + | 3.A.2.2.2 |
| TC | Rep_2271_c_24 | Rep_2271_c_24_11 | 10975 | 12348 | + | 3.A.2.2.2 |
| TC | Rep_2271_c_24 | Rep_2271_c_24_12 | 12363 | 13025 | + | 3.A.2.2.2 |
| STP | Rep_2271_c_24 | Rep_2271_c_24_13 | 13166 | 13774 | + | TetR_N |
| CAZyme | Rep_2271_c_24 | Rep_2271_c_24_14 | 13790 | 15151 | + | GH13_20 |
| CAZyme | Rep_2271_c_24 | Rep_2271_c_24_15 | 15209 | 17113 | + | CBM48 | GH13_9 |
| pfam | Rep_2271_c_24 | Rep_2271_c_24_16 | 17396 | 18163 | + | PP2C | PP2C_2 |
| TC | Rep_2271_c_24 | Rep_2271_c_24_17 | 18175 | 19977 | + | 1.E.43.3.3 |
Gene ID: Rep_2271_c_24_3
Type: TC
Location: 2847 - 4142 (+)
Type: TC
Location: 2847 - 4142 (+)
Gene ID: Rep_2271_c_24_4
Type:
Location: 4373 - 4681 (+)
Type:
Location: 4373 - 4681 (+)
Gene ID: Rep_2271_c_24_5
Type: TC
Location: 4722 - 6758 (+)
Type: TC
Location: 4722 - 6758 (+)
Gene ID: Rep_2271_c_24_6
Type: TC
Location: 6755 - 7225 (+)
Type: TC
Location: 6755 - 7225 (+)
Gene ID: Rep_2271_c_24_7
Type: pfam
Location: 7277 - 7876 (+)
Type: pfam
Location: 7277 - 7876 (+)
Gene ID: Rep_2271_c_24_8
Type: pfam
Location: 7898 - 8875 (+)
Type: pfam
Location: 7898 - 8875 (+)
Gene ID: Rep_2271_c_24_9
Type: TC
Location: 8868 - 9188 (+)
Type: TC
Location: 8868 - 9188 (+)
Gene ID: Rep_2271_c_24_10
Type: TC
Location: 9209 - 10975 (+)
Type: TC
Location: 9209 - 10975 (+)
Gene ID: Rep_2271_c_24_11
Type: TC
Location: 10975 - 12348 (+)
Type: TC
Location: 10975 - 12348 (+)
Gene ID: Rep_2271_c_24_12
Type: TC
Location: 12363 - 13025 (+)
Type: TC
Location: 12363 - 13025 (+)
Gene ID: Rep_2271_c_24_13
Type: STP
Location: 13166 - 13774 (+)
Type: STP
Location: 13166 - 13774 (+)
Gene ID: Rep_2271_c_24_14
Type: CAZyme
Location: 13790 - 15151 (+)
Type: CAZyme
Location: 13790 - 15151 (+)
Gene ID: Rep_2271_c_24_15
Type: CAZyme
Location: 15209 - 17113 (+)
Type: CAZyme
Location: 15209 - 17113 (+)
Gene ID: Rep_2271_c_24_16
Type: pfam
Location: 17396 - 18163 (+)
Type: pfam
Location: 17396 - 18163 (+)
Gene ID: Rep_2271_c_24_17
Type: TC
Location: 18175 - 19977 (+)
Type: TC
Location: 18175 - 19977 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia
Species
Blautia argi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.