Cluster: Rep_2271_CGC16
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2271
- CGC Family ID: CGCFAM_03764
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2271_c_4 | Rep_2271_c_4_65 | 76175 | 77026 | - | 3.A.1.1.11 |
| TC | Rep_2271_c_4 | Rep_2271_c_4_66 | 77043 | 77924 | - | 3.A.1.1.41 |
| STP | Rep_2271_c_4 | Rep_2271_c_4_67 | 77996 | 79288 | - | SBP_bac_1 |
| TF | Rep_2271_c_4 | Rep_2271_c_4_68 | 79463 | 81058 | - | HTH_AraC |
| TC | Rep_2271_c_4 | Rep_2271_c_4_69 | 81072 | 82856 | - | 8.A.59.2.1 |
| pfam | Rep_2271_c_4 | Rep_2271_c_4_70 | 82964 | 83707 | - | Amidohydro_2 |
| pfam | Rep_2271_c_4 | Rep_2271_c_4_71 | 83704 | 85407 | - | ILVD_EDD_N | ILV_EDD_C |
| CAZyme | Rep_2271_c_4 | Rep_2271_c_4_72 | 85423 | 88068 | - | CBM67 | GH78 |
| pfam | Rep_2271_c_4 | Rep_2271_c_4_73 | 88080 | 89081 | - | ADH_zinc_N | Shikimate_DH |
| CAZyme | Rep_2271_c_4 | Rep_2271_c_4_74 | 89291 | 90337 | + | GH179 |
| CAZyme | Rep_2271_c_4 | Rep_2271_c_4_75 | 90409 | 91731 | - | GH4 |
| TF | Rep_2271_c_4 | Rep_2271_c_4_76 | 91763 | 92683 | - | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2271_c_4 | Rep_2271_c_4_77 | 92710 | 94926 | - | GH36 |
| TC | Rep_2271_c_4 | Rep_2271_c_4_78 | 94991 | 95830 | - | 3.A.1.1.36 |
| TC | Rep_2271_c_4 | Rep_2271_c_4_79 | 95843 | 96742 | - | 3.A.1.1.20 |
Gene ID: Rep_2271_c_4_65
Type: TC
Location: 76175 - 77026 (-)
Type: TC
Location: 76175 - 77026 (-)
Gene ID: Rep_2271_c_4_66
Type: TC
Location: 77043 - 77924 (-)
Type: TC
Location: 77043 - 77924 (-)
Gene ID: Rep_2271_c_4_67
Type: STP
Location: 77996 - 79288 (-)
Type: STP
Location: 77996 - 79288 (-)
Gene ID: Rep_2271_c_4_68
Type: TF
Location: 79463 - 81058 (-)
Type: TF
Location: 79463 - 81058 (-)
Gene ID: Rep_2271_c_4_69
Type: TC
Location: 81072 - 82856 (-)
Type: TC
Location: 81072 - 82856 (-)
Gene ID: Rep_2271_c_4_70
Type: pfam
Location: 82964 - 83707 (-)
Type: pfam
Location: 82964 - 83707 (-)
Gene ID: Rep_2271_c_4_71
Type: pfam
Location: 83704 - 85407 (-)
Type: pfam
Location: 83704 - 85407 (-)
Gene ID: Rep_2271_c_4_72
Type: CAZyme
Location: 85423 - 88068 (-)
Type: CAZyme
Location: 85423 - 88068 (-)
Gene ID: Rep_2271_c_4_73
Type: pfam
Location: 88080 - 89081 (-)
Type: pfam
Location: 88080 - 89081 (-)
Gene ID: Rep_2271_c_4_74
Type: CAZyme
Location: 89291 - 90337 (+)
Type: CAZyme
Location: 89291 - 90337 (+)
Gene ID: Rep_2271_c_4_75
Type: CAZyme
Location: 90409 - 91731 (-)
Type: CAZyme
Location: 90409 - 91731 (-)
Gene ID: Rep_2271_c_4_76
Type: TF
Location: 91763 - 92683 (-)
Type: TF
Location: 91763 - 92683 (-)
Gene ID: Rep_2271_c_4_77
Type: CAZyme
Location: 92710 - 94926 (-)
Type: CAZyme
Location: 92710 - 94926 (-)
Gene ID: Rep_2271_c_4_78
Type: TC
Location: 94991 - 95830 (-)
Type: TC
Location: 94991 - 95830 (-)
Gene ID: Rep_2271_c_4_79
Type: TC
Location: 95843 - 96742 (-)
Type: TC
Location: 95843 - 96742 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia
Species
Blautia argi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.