Cluster: Rep_2271_CGC1
🧬 Cluster Details
- Gene Count: 30
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_2271
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2271_c_0 | Rep_2271_c_0_13 | 9715 | 11529 | - | GH2 |
| pfam | Rep_2271_c_0 | Rep_2271_c_0_14 | 11552 | 12406 | - | AP_endonuc_2 |
| pfam | Rep_2271_c_0 | Rep_2271_c_0_15 | 12420 | 13586 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | Rep_2271_c_0 | Rep_2271_c_0_16 | 13579 | 14613 | - | GH179 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_17 | 14630 | 15475 | - | 3.A.1.1.11 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_18 | 15479 | 16375 | - | 3.A.1.1.11 |
| CAZyme | Rep_2271_c_0 | Rep_2271_c_0_19 | 16403 | 17527 | - | GH105 |
| STP | Rep_2271_c_0 | Rep_2271_c_0_20 | 17615 | 18928 | - | SBP_bac_1 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_21 | 19168 | 21006 | + | 8.A.59.2.1 |
| TF | Rep_2271_c_0 | Rep_2271_c_0_22 | 21033 | 22565 | + | HTH_AraC |
| TC | Rep_2271_c_0 | Rep_2271_c_0_23 | 22579 | 23199 | - | 3.A.1.5.3 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_24 | 23189 | 24121 | - | 3.A.1.5.35 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_25 | 24131 | 24991 | - | 3.A.1.5.22 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_26 | 24984 | 25976 | - | 3.A.1.5.20 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_27 | 26067 | 27725 | - | 3.A.1.5.20 |
| CAZyme | Rep_2271_c_0 | Rep_2271_c_0_28 | 27939 | 30452 | - | GH31_2 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_29 | 30465 | 31766 | - | 2.A.56.1.5 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_30 | 31763 | 32266 | - | 2.A.56.1.2 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_31 | 32266 | 33303 | - | 2.A.56.1.2 |
| CAZyme | Rep_2271_c_0 | Rep_2271_c_0_32 | 33325 | 35826 | - | GH31_2 |
| TF | Rep_2271_c_0 | Rep_2271_c_0_33 | 36078 | 36896 | + | HTH_AraC | HTH_AraC |
| TC | Rep_2271_c_0 | Rep_2271_c_0_34 | 36893 | 38911 | - | 3.A.1.134.4 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_35 | 38908 | 39672 | - | 3.A.1.134.4 |
| STP | Rep_2271_c_0 | Rep_2271_c_0_36 | 39810 | 40817 | - | HATPase_c |
| TF | Rep_2271_c_0 | Rep_2271_c_0_37 | 40837 | 41511 | - | Trans_reg_C |
| TC | Rep_2271_c_0 | Rep_2271_c_0_38 | 41893 | 42651 | - | 3.A.1.5.35 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_39 | 42652 | 43434 | - | 3.A.1.5.22 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_40 | 43467 | 45050 | - | 3.A.1.5.20 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_41 | 45078 | 45944 | - | 3.A.1.5.38 |
| TC | Rep_2271_c_0 | Rep_2271_c_0_42 | 45941 | 46885 | - | 3.A.1.5.3 |
Gene ID: Rep_2271_c_0_13
Type: CAZyme
Location: 9715 - 11529 (-)
Type: CAZyme
Location: 9715 - 11529 (-)
Gene ID: Rep_2271_c_0_14
Type: pfam
Location: 11552 - 12406 (-)
Type: pfam
Location: 11552 - 12406 (-)
Gene ID: Rep_2271_c_0_15
Type: pfam
Location: 12420 - 13586 (-)
Type: pfam
Location: 12420 - 13586 (-)
Gene ID: Rep_2271_c_0_16
Type: CAZyme
Location: 13579 - 14613 (-)
Type: CAZyme
Location: 13579 - 14613 (-)
Gene ID: Rep_2271_c_0_17
Type: TC
Location: 14630 - 15475 (-)
Type: TC
Location: 14630 - 15475 (-)
Gene ID: Rep_2271_c_0_18
Type: TC
Location: 15479 - 16375 (-)
Type: TC
Location: 15479 - 16375 (-)
Gene ID: Rep_2271_c_0_19
Type: CAZyme
Location: 16403 - 17527 (-)
Type: CAZyme
Location: 16403 - 17527 (-)
Gene ID: Rep_2271_c_0_20
Type: STP
Location: 17615 - 18928 (-)
Type: STP
Location: 17615 - 18928 (-)
Gene ID: Rep_2271_c_0_21
Type: TC
Location: 19168 - 21006 (+)
Type: TC
Location: 19168 - 21006 (+)
Gene ID: Rep_2271_c_0_22
Type: TF
Location: 21033 - 22565 (+)
Type: TF
Location: 21033 - 22565 (+)
Gene ID: Rep_2271_c_0_23
Type: TC
Location: 22579 - 23199 (-)
Type: TC
Location: 22579 - 23199 (-)
Gene ID: Rep_2271_c_0_24
Type: TC
Location: 23189 - 24121 (-)
Type: TC
Location: 23189 - 24121 (-)
Gene ID: Rep_2271_c_0_25
Type: TC
Location: 24131 - 24991 (-)
Type: TC
Location: 24131 - 24991 (-)
Gene ID: Rep_2271_c_0_26
Type: TC
Location: 24984 - 25976 (-)
Type: TC
Location: 24984 - 25976 (-)
Gene ID: Rep_2271_c_0_27
Type: TC
Location: 26067 - 27725 (-)
Type: TC
Location: 26067 - 27725 (-)
Gene ID: Rep_2271_c_0_28
Type: CAZyme
Location: 27939 - 30452 (-)
Type: CAZyme
Location: 27939 - 30452 (-)
Gene ID: Rep_2271_c_0_29
Type: TC
Location: 30465 - 31766 (-)
Type: TC
Location: 30465 - 31766 (-)
Gene ID: Rep_2271_c_0_30
Type: TC
Location: 31763 - 32266 (-)
Type: TC
Location: 31763 - 32266 (-)
Gene ID: Rep_2271_c_0_31
Type: TC
Location: 32266 - 33303 (-)
Type: TC
Location: 32266 - 33303 (-)
Gene ID: Rep_2271_c_0_32
Type: CAZyme
Location: 33325 - 35826 (-)
Type: CAZyme
Location: 33325 - 35826 (-)
Gene ID: Rep_2271_c_0_33
Type: TF
Location: 36078 - 36896 (+)
Type: TF
Location: 36078 - 36896 (+)
Gene ID: Rep_2271_c_0_34
Type: TC
Location: 36893 - 38911 (-)
Type: TC
Location: 36893 - 38911 (-)
Gene ID: Rep_2271_c_0_35
Type: TC
Location: 38908 - 39672 (-)
Type: TC
Location: 38908 - 39672 (-)
Gene ID: Rep_2271_c_0_36
Type: STP
Location: 39810 - 40817 (-)
Type: STP
Location: 39810 - 40817 (-)
Gene ID: Rep_2271_c_0_37
Type: TF
Location: 40837 - 41511 (-)
Type: TF
Location: 40837 - 41511 (-)
Gene ID: Rep_2271_c_0_38
Type: TC
Location: 41893 - 42651 (-)
Type: TC
Location: 41893 - 42651 (-)
Gene ID: Rep_2271_c_0_39
Type: TC
Location: 42652 - 43434 (-)
Type: TC
Location: 42652 - 43434 (-)
Gene ID: Rep_2271_c_0_40
Type: TC
Location: 43467 - 45050 (-)
Type: TC
Location: 43467 - 45050 (-)
Gene ID: Rep_2271_c_0_41
Type: TC
Location: 45078 - 45944 (-)
Type: TC
Location: 45078 - 45944 (-)
Gene ID: Rep_2271_c_0_42
Type: TC
Location: 45941 - 46885 (-)
Type: TC
Location: 45941 - 46885 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia
Species
Blautia argi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.