dbCAN Logo

Cluster: Rep_223_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_223_c_261 Rep_223_c_261_2 2110 3453 + 2.A.38.1.1
TC Rep_223_c_261 Rep_223_c_261_3 3450 4907 + 2.A.38.1.3
pfam Rep_223_c_261 Rep_223_c_261_4 4975 5937 + PMI_typeI_cat | MPI_cupin_dom
CAZyme Rep_223_c_261 Rep_223_c_261_5 6002 8761 - GH2
Gene ID: Rep_223_c_261_2
Type: TC
Location: 2110 - 3453 (+)
Gene ID: Rep_223_c_261_3
Type: TC
Location: 3450 - 4907 (+)
Gene ID: Rep_223_c_261_4
Type: pfam
Location: 4975 - 5937 (+)
Gene ID: Rep_223_c_261_5
Type: CAZyme
Location: 6002 - 8761 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_223_c_261_4 vegetarian > vegan 1.16333 0.01287

🧭 Explore Read Mapping of CGC

← Back to Cluster List