Cluster: Rep_223_CGC34
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_223
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_223_c_180 | Rep_223_c_180_4 | 3380 | 6265 | - | 1.B.42.1.8 |
| pfam | Rep_223_c_180 | Rep_223_c_180_5 | 6281 | 6817 | - | HD |
| TC | Rep_223_c_180 | Rep_223_c_180_6 | 6833 | 8611 | - | 3.B.1.1.6 |
| NULL(UNKNOWN) | Rep_223_c_180 | Rep_223_c_180_7 | 9046 | 9174 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_223_c_180 | Rep_223_c_180_8 | 9296 | 9655 | + | RsfS |
| TC | Rep_223_c_180 | Rep_223_c_180_9 | 9695 | 11743 | + | 3.A.16.1.1 |
| pfam | Rep_223_c_180 | Rep_223_c_180_10 | 11844 | 12707 | + | CTP_transf_1 |
| CAZyme | Rep_223_c_180 | Rep_223_c_180_11 | 12776 | 14191 | - | GT19 |
Gene ID: Rep_223_c_180_4
Type: TC
Location: 3380 - 6265 (-)
Type: TC
Location: 3380 - 6265 (-)
Gene ID: Rep_223_c_180_5
Type: pfam
Location: 6281 - 6817 (-)
Type: pfam
Location: 6281 - 6817 (-)
Gene ID: Rep_223_c_180_6
Type: TC
Location: 6833 - 8611 (-)
Type: TC
Location: 6833 - 8611 (-)
Gene ID: Rep_223_c_180_7
Type:
Location: 9046 - 9174 (-)
Type:
Location: 9046 - 9174 (-)
Gene ID: Rep_223_c_180_8
Type: pfam
Location: 9296 - 9655 (+)
Type: pfam
Location: 9296 - 9655 (+)
Gene ID: Rep_223_c_180_9
Type: TC
Location: 9695 - 11743 (+)
Type: TC
Location: 9695 - 11743 (+)
Gene ID: Rep_223_c_180_10
Type: pfam
Location: 11844 - 12707 (+)
Type: pfam
Location: 11844 - 12707 (+)
Gene ID: Rep_223_c_180_11
Type: CAZyme
Location: 12776 - 14191 (-)
Type: CAZyme
Location: 12776 - 14191 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.