Cluster: Rep_2233_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2233
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2233_c_4 | Rep_2233_c_4_30 | 28625 | 29851 | + | 2.A.23.1.5 |
| pfam | Rep_2233_c_4 | Rep_2233_c_4_31 | 29904 | 30653 | - | HpcH_HpaI |
| TF | Rep_2233_c_4 | Rep_2233_c_4_32 | 30776 | 31672 | + | HTH_1 |
| CAZyme | Rep_2233_c_4 | Rep_2233_c_4_33 | 31732 | 33459 | + | GH13_20 |
Gene ID: Rep_2233_c_4_30
Type: TC
Location: 28625 - 29851 (+)
Type: TC
Location: 28625 - 29851 (+)
Gene ID: Rep_2233_c_4_31
Type: pfam
Location: 29904 - 30653 (-)
Type: pfam
Location: 29904 - 30653 (-)
Gene ID: Rep_2233_c_4_32
Type: TF
Location: 30776 - 31672 (+)
Type: TF
Location: 30776 - 31672 (+)
Gene ID: Rep_2233_c_4_33
Type: CAZyme
Location: 31732 - 33459 (+)
Type: CAZyme
Location: 31732 - 33459 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp018223365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.