Cluster: Rep_2233_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2233
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2233_c_2 | Rep_2233_c_2_37 | 46276 | 47655 | + | 3.A.1.1.45 |
| TC | Rep_2233_c_2 | Rep_2233_c_2_38 | 47734 | 48585 | + | 3.A.1.1.45 |
| TC | Rep_2233_c_2 | Rep_2233_c_2_39 | 48587 | 49429 | + | 3.A.1.1.45 |
| TF | Rep_2233_c_2 | Rep_2233_c_2_40 | 49440 | 50456 | + | LacI |
| TC | Rep_2233_c_2 | Rep_2233_c_2_41 | 50479 | 51576 | + | 3.A.1.1.26 |
| CAZyme | Rep_2233_c_2 | Rep_2233_c_2_42 | 51600 | 53093 | + | GH77 |
Gene ID: Rep_2233_c_2_37
Type: TC
Location: 46276 - 47655 (+)
Type: TC
Location: 46276 - 47655 (+)
Gene ID: Rep_2233_c_2_38
Type: TC
Location: 47734 - 48585 (+)
Type: TC
Location: 47734 - 48585 (+)
Gene ID: Rep_2233_c_2_39
Type: TC
Location: 48587 - 49429 (+)
Type: TC
Location: 48587 - 49429 (+)
Gene ID: Rep_2233_c_2_40
Type: TF
Location: 49440 - 50456 (+)
Type: TF
Location: 49440 - 50456 (+)
Gene ID: Rep_2233_c_2_41
Type: TC
Location: 50479 - 51576 (+)
Type: TC
Location: 50479 - 51576 (+)
Gene ID: Rep_2233_c_2_42
Type: CAZyme
Location: 51600 - 53093 (+)
Type: CAZyme
Location: 51600 - 53093 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp018223365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.