Cluster: Rep_2233_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2233
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2233_c_1 | Rep_2233_c_1_94 | 104101 | 105879 | + | GT2 |
| CAZyme | Rep_2233_c_1 | Rep_2233_c_1_95 | 105883 | 106839 | + | GT2 |
| TC | Rep_2233_c_1 | Rep_2233_c_1_96 | 106896 | 108305 | + | 9.B.18.1.1 |
| pfam | Rep_2233_c_1 | Rep_2233_c_1_97 | 108327 | 109463 | + | LytR_cpsA_psr |
| CAZyme | Rep_2233_c_1 | Rep_2233_c_1_98 | 109552 | 110472 | + | GT2 |
Gene ID: Rep_2233_c_1_94
Type: CAZyme
Location: 104101 - 105879 (+)
Type: CAZyme
Location: 104101 - 105879 (+)
Gene ID: Rep_2233_c_1_95
Type: CAZyme
Location: 105883 - 106839 (+)
Type: CAZyme
Location: 105883 - 106839 (+)
Gene ID: Rep_2233_c_1_96
Type: TC
Location: 106896 - 108305 (+)
Type: TC
Location: 106896 - 108305 (+)
Gene ID: Rep_2233_c_1_97
Type: pfam
Location: 108327 - 109463 (+)
Type: pfam
Location: 108327 - 109463 (+)
Gene ID: Rep_2233_c_1_98
Type: CAZyme
Location: 109552 - 110472 (+)
Type: CAZyme
Location: 109552 - 110472 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp018223365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.