Cluster: Rep_2233_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2233
- CGC Family ID: CGCFAM_05410
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2233_c_1 | Rep_2233_c_1_41 | 39144 | 39827 | + | CE4 |
| STP | Rep_2233_c_1 | Rep_2233_c_1_42 | 39901 | 41223 | + | AAA |
| pfam | Rep_2233_c_1 | Rep_2233_c_1_43 | 41269 | 41943 | - | Amidase_3 |
| TC | Rep_2233_c_1 | Rep_2233_c_1_44 | 42080 | 43018 | + | 2.A.7.3.31 |
Gene ID: Rep_2233_c_1_41
Type: CAZyme
Location: 39144 - 39827 (+)
Type: CAZyme
Location: 39144 - 39827 (+)
Gene ID: Rep_2233_c_1_42
Type: STP
Location: 39901 - 41223 (+)
Type: STP
Location: 39901 - 41223 (+)
Gene ID: Rep_2233_c_1_43
Type: pfam
Location: 41269 - 41943 (-)
Type: pfam
Location: 41269 - 41943 (-)
Gene ID: Rep_2233_c_1_44
Type: TC
Location: 42080 - 43018 (+)
Type: TC
Location: 42080 - 43018 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp018223365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.