Cluster: Rep_2233_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: beta-mannan/fructan
- Genome ID: Rep_2233
- CGC Family ID: CGCFAM_00094
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2233_c_27 | Rep_2233_c_27_2 | 265 | 789 | + | 9.B.156.3.1 |
| TF | Rep_2233_c_27 | Rep_2233_c_27_3 | 905 | 1909 | + | LacI |
| CAZyme | Rep_2233_c_27 | Rep_2233_c_27_4 | 1906 | 3315 | + | GH32 |
| TC | Rep_2233_c_27 | Rep_2233_c_27_5 | 3353 | 5248 | + | 4.A.1.2.12 |
Gene ID: Rep_2233_c_27_2
Type: TC
Location: 265 - 789 (+)
Type: TC
Location: 265 - 789 (+)
Gene ID: Rep_2233_c_27_3
Type: TF
Location: 905 - 1909 (+)
Type: TF
Location: 905 - 1909 (+)
Gene ID: Rep_2233_c_27_4
Type: CAZyme
Location: 1906 - 3315 (+)
Type: CAZyme
Location: 1906 - 3315 (+)
Gene ID: Rep_2233_c_27_5
Type: TC
Location: 3353 - 5248 (+)
Type: TC
Location: 3353 - 5248 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp018223365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.