Cluster: Rep_2233_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2233
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2233_c_24 | Rep_2233_c_24_24 | 26793 | 27116 | - | 4.A.3.2.8 |
| TC | Rep_2233_c_24 | Rep_2233_c_24_25 | 27121 | 27420 | - | 4.A.3.2.2 |
| TF | Rep_2233_c_24 | Rep_2233_c_24_26 | 27498 | 28211 | + | HTH_6 |
| CAZyme | Rep_2233_c_24 | Rep_2233_c_24_27 | 28436 | 29842 | + | GH4 |
| TC | Rep_2233_c_24 | Rep_2233_c_24_28 | 29861 | 31159 | + | 4.A.3.2.2 |
Gene ID: Rep_2233_c_24_24
Type: TC
Location: 26793 - 27116 (-)
Type: TC
Location: 26793 - 27116 (-)
Gene ID: Rep_2233_c_24_25
Type: TC
Location: 27121 - 27420 (-)
Type: TC
Location: 27121 - 27420 (-)
Gene ID: Rep_2233_c_24_26
Type: TF
Location: 27498 - 28211 (+)
Type: TF
Location: 27498 - 28211 (+)
Gene ID: Rep_2233_c_24_27
Type: CAZyme
Location: 28436 - 29842 (+)
Type: CAZyme
Location: 28436 - 29842 (+)
Gene ID: Rep_2233_c_24_28
Type: TC
Location: 29861 - 31159 (+)
Type: TC
Location: 29861 - 31159 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp018223365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2233_c_24_25 | vegetarian > vegan | 1.65000 | 0.01105 |